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PUBLICATIONS

2023

including publications from previous affiliations

Brukman N.G., Nakajima K.P., Valansi C., Flyak K., Li X., Higashiyama T., Podbilewicz B. (2023) A novel function for the sperm adhesion protein IZUMO1 in cell-cell fusion. J. Cell Biol. 222, e202207147.
https://doi.org/10.1083/jcb.202207147

Su S., Zhou X., Higashiyama T. (2023) Whole mount RNA in situ hybridization technique in Torenia ovules. Plant Reprod. 36, 139-146.
https://doi.org/10.1007/s00497-022-00455-2

Susaki D., Izumi R., Oi T., Takeuchi H., Shin J.M., Sugi N., Kinoshita T., Higashiyama T., Kawashima T., Maruyama D. (2023) F-actin regulates the polarized secretion of pollen tube attractants in Arabidopsis synergid cells. Plant Cell 35, 1222-1240.
https://doi.org/10.1093/plcell/koac371

Hossain M.F., Dutta A.K., Suzuki T., Higashiyama T., Miyamoto C., Ishiguro S., Maruta T., Muto Y., Nishimura K., Ishida H., Aboulela M., Hachiya T., Nakagawa T. (2023) Targeted expression of bgl23-D, a dominant-negative allele of ATCSLD5, affects cytokinesis of guard mother cells and exine formation of pollen in Arabidopsis thaliana. Planta 257, 64.
https://doi.org/10.1007/s00425-023-04097-0

Kimata Y., Yamada M., Murata T., Kuwata K., Sato A., Suzuki T., Kurihara D., Hasebe M., Higashiyama T., Ueda M. (2023) Novel inhibitors of microtubule organization and phragmoplast formation in diverse plant species. Life Sci. Alliance 6, e202201657.
https://doi.org/10.26508/lsa.202201657

Ramming A., Kappel C., Kanaoka M., Higashiyama T., Lenhard M. (2023) Poly(A) polymerase1 contributes to competence acquisition of pollen tubes growing through the style in Arabidopsis thaliana. Plant J. 114, 651-667.
https://doi.org/10.1111/tpj.16162

Nakagami S., Notaguchi M., Kondo T., Okamoto S., Ida T., Sato Y., Higashiyama T., Tsai A.Y., Ishida T., Sawa S. (2023) Root-knot nematode modulates plant CLE3-CLV1 signaling as a long-distance signal for successful infection. Sci Adv. 9, eadf4803.
https://doi.org/10.1126/sciadv.adf4803

Takahashi K., Suzuki S., Kawai-Toyooka H., Yamamoto K., Hamaji T., Ootsuki R., Yamaguchi H., Kawachi M., Higashiyama T., Nozaki H. (2023) Reorganization of the ancestral sex-determining regions during the evolution of trioecy in Pleodorina starrii. Commun. Biol. 6, 590
https://doi.org/10.1038/s42003-023-04949-1

Su S., Lei Y., Zhou X., Suzuki T., Xiao W., Higashiyama T. (2023) A BLADE-ON- PETIOLE orthologue regulates corolla differentiation along the proximodistal axis in Torenia fournieri. Nat. Commun. 14, 4763.
https://doi.org/10.1038/s41467-023-40399-3

Toda E., Kato N., Higashiyama T., Okamoto T. (2023) Genome editing approaches using reproductive cells/tissues in flowering plants. Front. Genome Edit. 4, 1085023.
https://doi.org/10.3389/fgeed.2022.1085023

Ueda M., Higashiyama T., Sugimoto K., Mochida K., Nakajima K., Hayashi M., Okamoto M., Nakamura Y., Seki M. (2023) MEETING REPORT: The 33rd International Conference on Arabidopsis Research (ICAR2023). Genes Cells 28, 825-830.
https://doi.org/10.1111/gtc.13071

2022

including publications from previous affiliations

Okuda S. (2022) Structural insight of peptide-ligand recognition by plant membrane receptors., Plant Morphology, 34, 29-36.
https://doi.org/10.5685/plmorphol.34.29

Kaneshiro I. Igarashi M., Higashiyama T., Mizuta Y. (2022) Target pollen isolation using automated infrared laser-mediated cell disruption. Quant. Plant Biol. 3, e30.
https://doi.org/10.1017/qpb.2022.24

Nomoto M., Skelly M.J., Itaya T., Mori T., Suzuki T., Matsushita T., Tokizawa M., Kuwata K., Mori H., Yamamoto Y.Y., Higashiyama T., Tsukagoshi H., Spoel S.H., Tada Y. (2021) Suppression of MYC transcription activators by the immune cofactor NPR1 fine-tunes plant immune responses. Cell Rep. 14, 110125.
https://doi.org/10.1016/j.celrep.2021.110125

Aini H., Sato Y., Uno K., Higashiyama T., Okamoto T. (2021) Dynamics of mitochondrial distribution during development and asymmetric division of rice zygotes. Plant Reprod. 35, 47-60.
https://doi.org/10.1007/s00497-021-00430-3

Yanagisawa N., Kozgunova E., Higashiyama T. (2021) Pulsatile reverse flow actuated microfluidic injector: toward the application for single-molecule chemotropism assay. RSC Adv. 11, 27011-27018.
https://doi.org/10.1039/D1RA04505A

Tanaka, N., Mogi, Y., Fujiwara, T., Yabe, K., Toyama, Y., Higashiyama, T. and Yoshida, Y. (2021) CZON-cutter – a CRISPR-Cas9 system for multiplexed organelle imaging in a simple unicellular alga. Journal of Cell Science 134, 1-11
https://doi.org/10.1242/jcs.258948

Matsumoto H., Kimata Y., Higaki T., Higashiyama T., Ueda M. (2021) Dynamic Rearrangement and Directional Migration of Tubular Vacuoles are Required for the Asymmetric Division of the Arabidopsis Zygote. Plant Cell Physiol. 62, 1280-1289.
https://doi.org/10.1093/pcp/pcab075

Kimata Y., Higaki T., Kurihara D., Ando N., Matsumoto H., Higashiyama T., Ueda M. (2021) Mitochondrial dynamics and segregation during the asymmetric division of Arabidopsis zygotes. Quant. Plant Biol. 1, e3
doi: 10.1017/qpb.2020.4

Takahashi K., Kawai-Toyooka H., Ootsuki R., Hamaji T., Tsuchikane Y., Sekimoto H., Higashiyama T., Nozaki H. (2021) Three sex phenotypes in a haploid algal species give insights into the evolutionary transition to a self-compatible mating system. Evolution, 75, 2984-2993.
https://doi.org/10.1111/evo.14345.

Tanaka, N., Mogi, Y., Fujiwara, T., Yabe, K., Toyama, Y., Higashiyama, T. and Yoshida, Y. (2021) CZON-cutter – a CRISPR-Cas9 system for multiplexed organelle imaging in a simple unicellular alga. Journal of Cell Science 134, 1-11
https://doi.org/10.1242/jcs.258948

Kurihara D., Mizuta Y., Nagahara S., Higashiyama T. (2021) ClearSeeAlpha: Advanced Optical Clearing for Whole-Plant Imaging. Plant Cell Physiol., 62,1302-1310.
https://doi.org/10.1093/pcp/pcab033

Okuda S. (2021) Molecular mechanisms of plant peptide binding to receptors. Peptides 144, 170614
https://doi.org/10.1016/j.peptides.2021.170614

Windari E.A., Ando M., Mizoguchi Y., Shimada H., Ohira K., Kagaya Y., Higashiyama T., Takayama S., Watanabe M., Suwabe K. (2021) Two aquaporins, SIP1;1 and PIP1;2, mediate water transport for pollen hydration in the Arabidopsis pistil. Plant Biotech. 38, 77-87.
https://doi.org/10.5511%2Fplantbiotechnology.20.1207a

Motomura K., Takeuchi H., Notaguchi M., Tsuchi H., Takeda A., Kinoshita T., Higashiyama T., Maruyama D. (2021) Persistent directional growth capability in Arabidopsis thaliana pollen tubes after nuclear elimination from the apex. Nat. Commun. 12, 2331.
https://doi.org/10.1038/s41467-021-22661-8

Susaki D., Daisuke M., Minako U., Higashiyama T., Kurihara D. (2021) Dynamics of the cell fate specifications during female gametophyte development in Arabidopsis. PLoS Biol. 19, e3001123.
https://doi.org/10.1371/journal.pbio.3001123

Nagahara S., Takeuchi H., Higashiyama T. (2021) Polyspermy Block in the Central Cell during Double Fertilization of Arabidopsis thaliana. Front. Plant Sci. 11, 588700.
https://doi.org/10.3389/fpls.2020.588700

 

2021

including publications from previous affiliations

東山哲也(2021)花の中での知られざる情報処理.情報処理 62, e4-e6.

Higashiyama T., Maizel A., Simon R. (2021) Seeing is believing: Advances in Plant Imaging Technologies. Plant Cell Physiol. 62, 1217-1220.
https://doi.org/10.1093/pcp/pcab133

Yanagisawa N., Kozgunova E., Grossmann G., Geitmann A., Higashiyama T. (2021) Microfluidics-based Bioassays and Imaging of Plant Cells. Plant Cell Physiol. 62, 1239-1250.
https://doi.org/10.1093/pcp/pcab067

Nomoto M., Skelly M.J., Itaya T., Mori T., Suzuki T., Matsushita T., Tokizawa M., Kuwata K., Mori H., Yamamoto Y.Y., Higashiyama T., Tsukagoshi H., Spoel S.H., Tada Y. (2021) Suppression of MYC transcription activators by the immune cofactor NPR1 fine-tunes plant immune responses. Cell Rep. 14, 110125.
https://doi.org/10.1016/j.celrep.2021.110125

Aini H., Sato Y., Uno K., Higashiyama T., Okamoto T. (2021) Dynamics of mitochondrial distribution during development and asymmetric division of rice zygotes. Plant Reprod. 35, 47-60.
https://doi.org/10.1007/s00497-021-00430-3

Yanagisawa N., Kozgunova E., Higashiyama T. (2021) Pulsatile reverse flow actuated microfluidic injector: toward the application for single-molecule chemotropism assay. RSC Adv. 11, 27011-27018.
https://doi.org/10.1039/D1RA04505A

Tanaka, N., Mogi, Y., Fujiwara, T., Yabe, K., Toyama, Y., Higashiyama, T. and Yoshida, Y. (2021) CZON-cutter – a CRISPR-Cas9 system for multiplexed organelle imaging in a simple unicellular alga. Journal of Cell Science 134, 1-11
https://doi.org/10.1242/jcs.258948

Matsumoto H., Kimata Y., Higaki T., Higashiyama T., Ueda M. (2021) Dynamic Rearrangement and Directional Migration of Tubular Vacuoles are Required for the Asymmetric Division of the Arabidopsis Zygote. Plant Cell Physiol. 62, 1280-1289.
https://doi.org/10.1093/pcp/pcab075

Kimata Y., Higaki T., Kurihara D., Ando N., Matsumoto H., Higashiyama T., Ueda M. (2021) Mitochondrial dynamics and segregation during the asymmetric division of Arabidopsis zygotes. Quant. Plant Biol. 1, e3
doi: 10.1017/qpb.2020.4

Takahashi K., Kawai-Toyooka H., Ootsuki R., Hamaji T., Tsuchikane Y., Sekimoto H., Higashiyama T., Nozaki H. (2021) Three sex phenotypes in a haploid algal species give insights into the evolutionary transition to a self-compatible mating system. Evolution, 75, 2984-2993.
https://doi.org/10.1111/evo.14345.

Tanaka, N., Mogi, Y., Fujiwara, T., Yabe, K., Toyama, Y., Higashiyama, T. and Yoshida, Y. (2021) CZON-cutter – a CRISPR-Cas9 system for multiplexed organelle imaging in a simple unicellular alga. Journal of Cell Science 134, 1-11
https://doi.org/10.1242/jcs.258948

Kurihara D., Mizuta Y., Nagahara S., Higashiyama T. (2021) ClearSeeAlpha: Advanced Optical Clearing for Whole-Plant Imaging. Plant Cell Physiol., 62,1302-1310.
https://doi.org/10.1093/pcp/pcab033

Okuda S. (2021) Molecular mechanisms of plant peptide binding to receptors. Peptides 144, 170614
https://doi.org/10.1016/j.peptides.2021.170614

Windari E.A., Ando M., Mizoguchi Y., Shimada H., Ohira K., Kagaya Y., Higashiyama T., Takayama S., Watanabe M., Suwabe K. (2021) Two aquaporins, SIP1;1 and PIP1;2, mediate water transport for pollen hydration in the Arabidopsis pistil. Plant Biotech. 38, 77-87.
https://doi.org/10.5511%2Fplantbiotechnology.20.1207a

Motomura K., Takeuchi H., Notaguchi M., Tsuchi H., Takeda A., Kinoshita T., Higashiyama T., Maruyama D. (2021) Persistent directional growth capability in Arabidopsis thaliana pollen tubes after nuclear elimination from the apex. Nat. Commun. 12, 2331.
https://doi.org/10.1038/s41467-021-22661-8

Susaki D., Daisuke M., Minako U., Higashiyama T., Kurihara D. (2021) Dynamics of the cell fate specifications during female gametophyte development in Arabidopsis. PLoS Biol. 19, e3001123.
https://doi.org/10.1371/journal.pbio.3001123

Nagahara S., Takeuchi H., Higashiyama T. (2021) Polyspermy Block in the Central Cell during Double Fertilization of Arabidopsis thaliana. Front. Plant Sci. 11, 588700.

https://doi.org/10.3389/fpls.2020.588700

 

2020

including publications from previous affiliations

Su S., Nagae T.T., Higashiyama T. (2020) GPI-Anchored Proteins Cooperate in the Long Journey of the Pollen Tube. Mol. Plant 13, 8-10.
https://doi.org/10.1016/j.molp.2019.12.009

Crook A D, Willoughby A C, Hazak O, Okuda S, VanDerMolen K R, Soyars C L, Cattaneo P, Clark N M, Sozzani R, Hothorn M, Hardtke C S, Nimchuk Z L (2020) BAM1/2 receptor kinase signaling drives CLE peptide-mediated formative cell divisions in Arabidopsis roots. Proc Natl Acad Sci U S A 117 (51) 32750-32756.
https://doi.org/10.1073/pnas.2018565117

Steinbrenner A D, Muñoz-Amatriaín M, Chaparro A F, Aguilar-Venegas J M, Lo S, Okuda S, Glauser G, Dongiovanni J, Shi D, Hall M, Crubaugh D, Holton N, Zipfel C, Abagyan R, Turlings T C J, Close T J, Huffaker A, Schmelz E A (2020) A receptor-like protein mediates plant immune responses to herbivore-associated molecular patterns. Proc Natl Acad Sci U S A 117(49):31510-31518.
https://doi.org/10.1073/pnas.2018415117

Kimata Y., Higaki T., Kurihara D., Ando N., Matsumoto H., Higashiyama T., Ueda M. (2020) Mitochondrial dynamics and segregation during the asymmetric division of Arabidopsis zygotes. Quant. Plant Biol. 1, e3
https://doi.org/10.1017/qpb.2020.4

Nishikawa S., Yamaguchi Y., Suzuki C., Yabe A., Sato Y., Kurihara D., Sato Y., Susaki D., Higashiyama T., Maruyama D. (2020) Arabidopsis GEX1 is a nuclear membrane protein of gametes required for nuclear fusion during reproduction. Front. Plant Sci. 11, 548032.
https://doi.org/10.3389/fpls.2020.548032

Kawamoto N., Del Carpio D.P., Hofmann A., Mizuta Y., Kurihara D., Higashiyama T., Uchida N., Torii K.U., Colombo L., Groth G., Simon R. (2020) A peptide pair coordinates regular ovule initiation patterns with seed number and fruit size. Curr. Biol. 30, 4352-4361.
https://doi.org/10.1016/j.cub.2020.08.050

Notaguchi M., Kurotani K., Sato Y., Tabata R., Kawakatsu Y., Okayasu K., Sawai Y., Okada R., Asahina M., Ichihashi Y., Shirasu K., Suzuki T., Niwa M., Higashiyama T. (2020) Cell–cell adhesion in plant grafting is facilitated by β-1,4-glucanases. Science 369, 698-702.
https://doi.org/10.1126/science.abc3710

Tsutsui H., Yanagisawa N., Kawakatsu Y., Ikematsu S., Sawai Y., Tabata R., Arata H., Higashiyama T., Notaguchi M. (2020) Micrografting device for testing systemic signaling in Arabidopsis. Plant J. 103, 918-929.
https://doi.org/10.1111/tpj.14768

Borg M., Jacob Y., Susaki D., LeBlanc C., Buendía D., Axelsson E., Kawashima T., Voigt P., Boavida L., Becker J., Higashiyama T., Martienssen R., Berger F. (2020) Targeted reprogramming of H3K27me3 resets epigenetic memory in plant paternal chromatin. Nature Cell Biol. 22, 621-629.
https://doi.org/10.1038/s41556-020-0515-y

Motomura K., Arae T., Uramoto H.A., Suzuki Y., Takeuchi H., Suzuki T., Ichihashi Y., Shibata A., Shirasu K., Takeda A., Higashiyama T., Chiba Y. (2020) AtNOT1 is a novel regulator of gene expression during pollen development. Plant Cell Physiol. 61, 712-721. COVER OF THE ISSUE
https://doi.org/10.1093/pcp/pcz235

Nakano S., Ikeda M., Tsukada Y., Fei X., Suzuki T., Niino Y., Ahluwalia R., Sano A., Kondo R., Ihara K., Miyawaki A., Hashimoto K., Higashiyama T., Mori I. (2020) Presynaptic MAST kinase controls opposing postsynaptic responses to convey stimulus valence in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 117, 1638-1647.
https://doi.org/10.1073/pnas.1909240117

Liu X., Wu X., Adhikari P.B., Zhu S., Kinoshita Y., Berger F., Higashiyama T., Kasahara R.D. (2020) Establishment of a novel method for the identification of fertilization defective mutants in Arabidopsis thaliana. Biochem Biophys Res Commun. 521, 928-932.
https://doi.org/10.1016/j.bbrc.2019.11.028

Maruyama D., Higashiyama T., Endo T., Nishikawa S. (2020) Fertilization-Coupled Sperm Nuclear Fusion is Required for Normal Endosperm Nuclear Proliferation. Plant Cell Physiol. 61, 29-40. COVER OF THE ISSUE
https://doi.org/10.1093/pcp/pcz158

Luo L., Ando S., Sakamoto Y., Suzuki T., Takahashi H., Ishibashi N., Kojima S., Kurihara D., Higashiyama T., Yamamoto K. T., Matsunaga S., Machida C., Sasabe M., Machida Y. (2020) The formation of perinucleolar bodies is important for normal leaf development and requires the zinc-finger DNA-binding motif in Arabidopsis ASYMMETRIC LEAVES2. Plant J., 101, 1118-1134.

https://doi.org/10.1111/tpj.14579

 

2019

including publications from previous affiliations

Tsutsui H., Sato Y., Susaki D., Higashiyama T. (2019) Microtubule depletion domain 1 localizes at the boundary between female gametes in Arabidopsis thaliana. Mol. Reprod. Dev. 86, 925
.
https://doi.org/10.1002/mrd.23175

Nozoye T., von Wiren N., Sato Y., Higashiyama T., Nakanishi H., Nishizawa N.K. (2019) Characterization of the nicotianamine exporter ENA1 in rice. Front. Plant Sci. 10, 502.
https://doi.org/10.3389/fpls.2019.00502
 

Maki H., Sakaoka S., Itaya T., Suzuki T., Mabuchi K., Amabe T., Suzuki N., Higashiyama T., Tada Y., Nakagawa T., Morikami A., Tsukagoshi H. (2019) ANAC032 regulates root growth through the MYB30 gene regulatory network. Sci. Reports 9, 11358.
https://doi.org/10.1038/s41598-019-47822-0

Kimata Y., Kato T., Higaki T., Kurihara D., Yamada T., Segami S., Morita M.T., Maeshima M., Hasezawa S., Higashiyama T., Tasaka M. Ueda M. (2019) Polar vacuolar distribution is essential for accurate asymmetric division of Arabidopsis zygotes. Proc. Natl. Acad. Sci. USA 116, 2338-2343.
https://doi.org/10.1073/pnas.1814160116

Ohno M., Ando T., Priest D.G., Kumar V., Yoshida Y., Taniguchi Y. (2019) Sub-nucleosomal genome structure reveals distinct nucleosome folding motifs. Cell 176, 520-534.e25.
https://doi.org/10.1016/j.cell.2018.12.014

Yoshida Y., Mogi Y. (2019) How do plastids and mitochondria divide? Microscopy 68, 45-56.

https://doi.org/10.1093/jmicro/dfy132

Xiao W., Su S., Higashiyama T., Luo D. (2019) A homolog of the ALOG family controls corolla tube differentiation in Torenia fournieri. Development 146, dev177410.
https://doi.org/10.1242/dev.177410

Yoshida Y., Taniguchi Y. (2019) Simultaneous single-cell measurements demonstrate a positive correlation between RNA copy number for mitochondrial division and fusion genes and mitochondrial fragmentation. Cytologia 84, 15–23.
https://doi.org/10.1508/cytologia.84.15

Yamamoto S., Uchida Y., Ohtani T., Nozaki E., Yin C., Goto Y., Kaminatsui N., Higashiyama T., Suzuki T., Takemoto T., Shiraishi Y., Kuroiwa A. (2019) Hoxa13 regulates the expression of common Hox target genes involved in cartilage development to coordinate the expansion of the autopod anlagen. Dev. Growth Differ. 61, 228-251.
https://doi.org/10.1111/dgd.12601

Kurita K., Sakamoto Y., Naruse S., Matsunaga T.M., Arata H., Higashiyama T., Habu Y., Utsumi Y., Utsumi C., Tanaka M., Takahashi S., Kim J.M., Seki M., Sakamoto T., Matsunaga S. (2019) Intracellular localization of histone deacetylase HDA6 in plants. J. Plant Res. 132, 629-640.

https://doi.org/10.1007/s10265-019-01124-8

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