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PUBLICATIONS
2023
including publications from previous affiliations
Brukman N.G., Nakajima K.P., Valansi C., Flyak K., Li X., Higashiyama T., Podbilewicz B. (2023) A novel function for the sperm adhesion protein IZUMO1 in cell-cell fusion. J. Cell Biol. 222, e202207147.
https://doi.org/10.1083/jcb.202207147
Su S., Zhou X., Higashiyama T. (2023) Whole mount RNA in situ hybridization technique in Torenia ovules. Plant Reprod. 36, 139-146.
https://doi.org/10.1007/s00497-022-00455-2
Susaki D., Izumi R., Oi T., Takeuchi H., Shin J.M., Sugi N., Kinoshita T., Higashiyama T., Kawashima T., Maruyama D. (2023) F-actin regulates the polarized secretion of pollen tube attractants in Arabidopsis synergid cells. Plant Cell 35, 1222-1240.
https://doi.org/10.1093/plcell/koac371
Hossain M.F., Dutta A.K., Suzuki T., Higashiyama T., Miyamoto C., Ishiguro S., Maruta T., Muto Y., Nishimura K., Ishida H., Aboulela M., Hachiya T., Nakagawa T. (2023) Targeted expression of bgl23-D, a dominant-negative allele of ATCSLD5, affects cytokinesis of guard mother cells and exine formation of pollen in Arabidopsis thaliana. Planta 257, 64.
https://doi.org/10.1007/s00425-023-04097-0
Kimata Y., Yamada M., Murata T., Kuwata K., Sato A., Suzuki T., Kurihara D., Hasebe M., Higashiyama T., Ueda M. (2023) Novel inhibitors of microtubule organization and phragmoplast formation in diverse plant species. Life Sci. Alliance 6, e202201657.
https://doi.org/10.26508/lsa.202201657
Ramming A., Kappel C., Kanaoka M., Higashiyama T., Lenhard M. (2023) Poly(A) polymerase1 contributes to competence acquisition of pollen tubes growing through the style in Arabidopsis thaliana. Plant J. 114, 651-667.
https://doi.org/10.1111/tpj.16162
Nakagami S., Notaguchi M., Kondo T., Okamoto S., Ida T., Sato Y., Higashiyama T., Tsai A.Y., Ishida T., Sawa S. (2023) Root-knot nematode modulates plant CLE3-CLV1 signaling as a long-distance signal for successful infection. Sci Adv. 9, eadf4803.
https://doi.org/10.1126/sciadv.adf4803
Takahashi K., Suzuki S., Kawai-Toyooka H., Yamamoto K., Hamaji T., Ootsuki R., Yamaguchi H., Kawachi M., Higashiyama T., Nozaki H. (2023) Reorganization of the ancestral sex-determining regions during the evolution of trioecy in Pleodorina starrii. Commun. Biol. 6, 590
https://doi.org/10.1038/s42003-023-04949-1
Su S., Lei Y., Zhou X., Suzuki T., Xiao W., Higashiyama T. (2023) A BLADE-ON- PETIOLE orthologue regulates corolla differentiation along the proximodistal axis in Torenia fournieri. Nat. Commun. 14, 4763.
https://doi.org/10.1038/s41467-023-40399-3
Toda E., Kato N., Higashiyama T., Okamoto T. (2023) Genome editing approaches using reproductive cells/tissues in flowering plants. Front. Genome Edit. 4, 1085023.
https://doi.org/10.3389/fgeed.2022.1085023
Ueda M., Higashiyama T., Sugimoto K., Mochida K., Nakajima K., Hayashi M., Okamoto M., Nakamura Y., Seki M. (2023) MEETING REPORT: The 33rd International Conference on Arabidopsis Research (ICAR2023). Genes Cells 28, 825-830.
https://doi.org/10.1111/gtc.13071
2022
including publications from previous affiliations
Okuda S. (2022) Structural insight of peptide-ligand recognition by plant membrane receptors., Plant Morphology, 34, 29-36.
https://doi.org/10.5685/plmorphol.34.29
Kaneshiro I. Igarashi M., Higashiyama T., Mizuta Y. (2022) Target pollen isolation using automated infrared laser-mediated cell disruption. Quant. Plant Biol. 3, e30.
https://doi.org/10.1017/qpb.2022.24
Nomoto M., Skelly M.J., Itaya T., Mori T., Suzuki T., Matsushita T., Tokizawa M., Kuwata K., Mori H., Yamamoto Y.Y., Higashiyama T., Tsukagoshi H., Spoel S.H., Tada Y. (2021) Suppression of MYC transcription activators by the immune cofactor NPR1 fine-tunes plant immune responses. Cell Rep. 14, 110125.
https://doi.org/10.1016/j.celrep.2021.110125
Aini H., Sato Y., Uno K., Higashiyama T., Okamoto T. (2021) Dynamics of mitochondrial distribution during development and asymmetric division of rice zygotes. Plant Reprod. 35, 47-60.
https://doi.org/10.1007/s00497-021-00430-3
Yanagisawa N., Kozgunova E., Higashiyama T. (2021) Pulsatile reverse flow actuated microfluidic injector: toward the application for single-molecule chemotropism assay. RSC Adv. 11, 27011-27018.
https://doi.org/10.1039/D1RA04505A
Tanaka, N., Mogi, Y., Fujiwara, T., Yabe, K., Toyama, Y., Higashiyama, T. and Yoshida, Y. (2021) CZON-cutter – a CRISPR-Cas9 system for multiplexed organelle imaging in a simple unicellular alga. Journal of Cell Science 134, 1-11
https://doi.org/10.1242/jcs.258948
Matsumoto H., Kimata Y., Higaki T., Higashiyama T., Ueda M. (2021) Dynamic Rearrangement and Directional Migration of Tubular Vacuoles are Required for the Asymmetric Division of the Arabidopsis Zygote. Plant Cell Physiol. 62, 1280-1289.
https://doi.org/10.1093/pcp/pcab075
Kimata Y., Higaki T., Kurihara D., Ando N., Matsumoto H., Higashiyama T., Ueda M. (2021) Mitochondrial dynamics and segregation during the asymmetric division of Arabidopsis zygotes. Quant. Plant Biol. 1, e3
doi: 10.1017/qpb.2020.4
Takahashi K., Kawai-Toyooka H., Ootsuki R., Hamaji T., Tsuchikane Y., Sekimoto H., Higashiyama T., Nozaki H. (2021) Three sex phenotypes in a haploid algal species give insights into the evolutionary transition to a self-compatible mating system. Evolution, 75, 2984-2993.
https://doi.org/10.1111/evo.14345.
Tanaka, N., Mogi, Y., Fujiwara, T., Yabe, K., Toyama, Y., Higashiyama, T. and Yoshida, Y. (2021) CZON-cutter – a CRISPR-Cas9 system for multiplexed organelle imaging in a simple unicellular alga. Journal of Cell Science 134, 1-11
https://doi.org/10.1242/jcs.258948
Kurihara D., Mizuta Y., Nagahara S., Higashiyama T. (2021) ClearSeeAlpha: Advanced Optical Clearing for Whole-Plant Imaging. Plant Cell Physiol., 62,1302-1310.
https://doi.org/10.1093/pcp/pcab033
Okuda S. (2021) Molecular mechanisms of plant peptide binding to receptors. Peptides 144, 170614
https://doi.org/10.1016/j.peptides.2021.170614
Windari E.A., Ando M., Mizoguchi Y., Shimada H., Ohira K., Kagaya Y., Higashiyama T., Takayama S., Watanabe M., Suwabe K. (2021) Two aquaporins, SIP1;1 and PIP1;2, mediate water transport for pollen hydration in the Arabidopsis pistil. Plant Biotech. 38, 77-87.
https://doi.org/10.5511%2Fplantbiotechnology.20.1207a
Motomura K., Takeuchi H., Notaguchi M., Tsuchi H., Takeda A., Kinoshita T., Higashiyama T., Maruyama D. (2021) Persistent directional growth capability in Arabidopsis thaliana pollen tubes after nuclear elimination from the apex. Nat. Commun. 12, 2331.
https://doi.org/10.1038/s41467-021-22661-8
Susaki D., Daisuke M., Minako U., Higashiyama T., Kurihara D. (2021) Dynamics of the cell fate specifications during female gametophyte development in Arabidopsis. PLoS Biol. 19, e3001123.
https://doi.org/10.1371/journal.pbio.3001123
Nagahara S., Takeuchi H., Higashiyama T. (2021) Polyspermy Block in the Central Cell during Double Fertilization of Arabidopsis thaliana. Front. Plant Sci. 11, 588700.
https://doi.org/10.3389/fpls.2020.588700
2021
including publications from previous affiliations
東山哲也（2021）花の中での知られざる情報処理．情報処理 62, e4-e6.
Higashiyama T., Maizel A., Simon R. (2021) Seeing is believing: Advances in Plant Imaging Technologies. Plant Cell Physiol. 62, 1217-1220.
https://doi.org/10.1093/pcp/pcab133
Yanagisawa N., Kozgunova E., Grossmann G., Geitmann A., Higashiyama T. (2021) Microfluidics-based Bioassays and Imaging of Plant Cells. Plant Cell Physiol. 62, 1239-1250.
https://doi.org/10.1093/pcp/pcab067
Nomoto M., Skelly M.J., Itaya T., Mori T., Suzuki T., Matsushita T., Tokizawa M., Kuwata K., Mori H., Yamamoto Y.Y., Higashiyama T., Tsukagoshi H., Spoel S.H., Tada Y. (2021) Suppression of MYC transcription activators by the immune cofactor NPR1 fine-tunes plant immune responses. Cell Rep. 14, 110125.
https://doi.org/10.1016/j.celrep.2021.110125
Aini H., Sato Y., Uno K., Higashiyama T., Okamoto T. (2021) Dynamics of mitochondrial distribution during development and asymmetric division of rice zygotes. Plant Reprod. 35, 47-60.
https://doi.org/10.1007/s00497-021-00430-3
Yanagisawa N., Kozgunova E., Higashiyama T. (2021) Pulsatile reverse flow actuated microfluidic injector: toward the application for single-molecule chemotropism assay. RSC Adv. 11, 27011-27018.
https://doi.org/10.1039/D1RA04505A
Tanaka, N., Mogi, Y., Fujiwara, T., Yabe, K., Toyama, Y., Higashiyama, T. and Yoshida, Y. (2021) CZON-cutter – a CRISPR-Cas9 system for multiplexed organelle imaging in a simple unicellular alga. Journal of Cell Science 134, 1-11
https://doi.org/10.1242/jcs.258948
Matsumoto H., Kimata Y., Higaki T., Higashiyama T., Ueda M. (2021) Dynamic Rearrangement and Directional Migration of Tubular Vacuoles are Required for the Asymmetric Division of the Arabidopsis Zygote. Plant Cell Physiol. 62, 1280-1289.
https://doi.org/10.1093/pcp/pcab075
Kimata Y., Higaki T., Kurihara D., Ando N., Matsumoto H., Higashiyama T., Ueda M. (2021) Mitochondrial dynamics and segregation during the asymmetric division of Arabidopsis zygotes. Quant. Plant Biol. 1, e3
doi: 10.1017/qpb.2020.4
Takahashi K., Kawai-Toyooka H., Ootsuki R., Hamaji T., Tsuchikane Y., Sekimoto H., Higashiyama T., Nozaki H. (2021) Three sex phenotypes in a haploid algal species give insights into the evolutionary transition to a self-compatible mating system. Evolution, 75, 2984-2993.
https://doi.org/10.1111/evo.14345.
Tanaka, N., Mogi, Y., Fujiwara, T., Yabe, K., Toyama, Y., Higashiyama, T. and Yoshida, Y. (2021) CZON-cutter – a CRISPR-Cas9 system for multiplexed organelle imaging in a simple unicellular alga. Journal of Cell Science 134, 1-11
https://doi.org/10.1242/jcs.258948
Kurihara D., Mizuta Y., Nagahara S., Higashiyama T. (2021) ClearSeeAlpha: Advanced Optical Clearing for Whole-Plant Imaging. Plant Cell Physiol., 62,1302-1310.
https://doi.org/10.1093/pcp/pcab033
Okuda S. (2021) Molecular mechanisms of plant peptide binding to receptors. Peptides 144, 170614
https://doi.org/10.1016/j.peptides.2021.170614
Windari E.A., Ando M., Mizoguchi Y., Shimada H., Ohira K., Kagaya Y., Higashiyama T., Takayama S., Watanabe M., Suwabe K. (2021) Two aquaporins, SIP1;1 and PIP1;2, mediate water transport for pollen hydration in the Arabidopsis pistil. Plant Biotech. 38, 77-87.
https://doi.org/10.5511%2Fplantbiotechnology.20.1207a
Motomura K., Takeuchi H., Notaguchi M., Tsuchi H., Takeda A., Kinoshita T., Higashiyama T., Maruyama D. (2021) Persistent directional growth capability in Arabidopsis thaliana pollen tubes after nuclear elimination from the apex. Nat. Commun. 12, 2331.
https://doi.org/10.1038/s41467-021-22661-8
Susaki D., Daisuke M., Minako U., Higashiyama T., Kurihara D. (2021) Dynamics of the cell fate specifications during female gametophyte development in Arabidopsis. PLoS Biol. 19, e3001123.
https://doi.org/10.1371/journal.pbio.3001123
Nagahara S., Takeuchi H., Higashiyama T. (2021) Polyspermy Block in the Central Cell during Double Fertilization of Arabidopsis thaliana. Front. Plant Sci. 11, 588700.
https://doi.org/10.3389/fpls.2020.588700
2020
including publications from previous affiliations
Su S., Nagae T.T., Higashiyama T. (2020) GPI-Anchored Proteins Cooperate in the Long Journey of the Pollen Tube. Mol. Plant 13, 8-10.
https://doi.org/10.1016/j.molp.2019.12.009
Crook A D, Willoughby A C, Hazak O, Okuda S, VanDerMolen K R, Soyars C L, Cattaneo P, Clark N M, Sozzani R, Hothorn M, Hardtke C S, Nimchuk Z L (2020) BAM1/2 receptor kinase signaling drives CLE peptide-mediated formative cell divisions in Arabidopsis roots. Proc Natl Acad Sci U S A 117 (51) 32750-32756.
https://doi.org/10.1073/pnas.2018565117
Steinbrenner A D, Muñoz-Amatriaín M, Chaparro A F, Aguilar-Venegas J M, Lo S, Okuda S, Glauser G, Dongiovanni J, Shi D, Hall M, Crubaugh D, Holton N, Zipfel C, Abagyan R, Turlings T C J, Close T J, Huffaker A, Schmelz E A (2020) A receptor-like protein mediates plant immune responses to herbivore-associated molecular patterns. Proc Natl Acad Sci U S A 117(49):31510-31518.
https://doi.org/10.1073/pnas.2018415117
Kimata Y., Higaki T., Kurihara D., Ando N., Matsumoto H., Higashiyama T., Ueda M. (2020) Mitochondrial dynamics and segregation during the asymmetric division of Arabidopsis zygotes. Quant. Plant Biol. 1, e3
https://doi.org/10.1017/qpb.2020.4
Nishikawa S., Yamaguchi Y., Suzuki C., Yabe A., Sato Y., Kurihara D., Sato Y., Susaki D., Higashiyama T., Maruyama D. (2020) Arabidopsis GEX1 is a nuclear membrane protein of gametes required for nuclear fusion during reproduction. Front. Plant Sci. 11, 548032.
https://doi.org/10.3389/fpls.2020.548032
Kawamoto N., Del Carpio D.P., Hofmann A., Mizuta Y., Kurihara D., Higashiyama T., Uchida N., Torii K.U., Colombo L., Groth G., Simon R. (2020) A peptide pair coordinates regular ovule initiation patterns with seed number and fruit size. Curr. Biol. 30, 4352-4361.
https://doi.org/10.1016/j.cub.2020.08.050
Notaguchi M., Kurotani K., Sato Y., Tabata R., Kawakatsu Y., Okayasu K., Sawai Y., Okada R., Asahina M., Ichihashi Y., Shirasu K., Suzuki T., Niwa M., Higashiyama T. (2020) Cell–cell adhesion in plant grafting is facilitated by β-1,4-glucanases. Science 369, 698-702.
https://doi.org/10.1126/science.abc3710
Tsutsui H., Yanagisawa N., Kawakatsu Y., Ikematsu S., Sawai Y., Tabata R., Arata H., Higashiyama T., Notaguchi M. (2020) Micrografting device for testing systemic signaling in Arabidopsis. Plant J. 103, 918-929.
https://doi.org/10.1111/tpj.14768
Borg M., Jacob Y., Susaki D., LeBlanc C., Buendía D., Axelsson E., Kawashima T., Voigt P., Boavida L., Becker J., Higashiyama T., Martienssen R., Berger F. (2020) Targeted reprogramming of H3K27me3 resets epigenetic memory in plant paternal chromatin. Nature Cell Biol. 22, 621-629.
https://doi.org/10.1038/s41556-020-0515-y
Motomura K., Arae T., Uramoto H.A., Suzuki Y., Takeuchi H., Suzuki T., Ichihashi Y., Shibata A., Shirasu K., Takeda A., Higashiyama T., Chiba Y. (2020) AtNOT1 is a novel regulator of gene expression during pollen development. Plant Cell Physiol. 61, 712-721. COVER OF THE ISSUE
https://doi.org/10.1093/pcp/pcz235
Nakano S., Ikeda M., Tsukada Y., Fei X., Suzuki T., Niino Y., Ahluwalia R., Sano A., Kondo R., Ihara K., Miyawaki A., Hashimoto K., Higashiyama T., Mori I. (2020) Presynaptic MAST kinase controls opposing postsynaptic responses to convey stimulus valence in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 117, 1638-1647.
https://doi.org/10.1073/pnas.1909240117
Liu X., Wu X., Adhikari P.B., Zhu S., Kinoshita Y., Berger F., Higashiyama T., Kasahara R.D. (2020) Establishment of a novel method for the identification of fertilization defective mutants in Arabidopsis thaliana. Biochem Biophys Res Commun. 521, 928-932.
https://doi.org/10.1016/j.bbrc.2019.11.028
Maruyama D., Higashiyama T., Endo T., Nishikawa S. (2020) Fertilization-Coupled Sperm Nuclear Fusion is Required for Normal Endosperm Nuclear Proliferation. Plant Cell Physiol. 61, 29-40. COVER OF THE ISSUE
https://doi.org/10.1093/pcp/pcz158
Luo L., Ando S., Sakamoto Y., Suzuki T., Takahashi H., Ishibashi N., Kojima S., Kurihara D., Higashiyama T., Yamamoto K. T., Matsunaga S., Machida C., Sasabe M., Machida Y. (2020) The formation of perinucleolar bodies is important for normal leaf development and requires the zinc-finger DNA-binding motif in Arabidopsis ASYMMETRIC LEAVES2. Plant J., 101, 1118-1134.
https://doi.org/10.1111/tpj.14579
2019
including publications from previous affiliations
Tsutsui H., Sato Y., Susaki D., Higashiyama T. (2019) Microtubule depletion domain 1 localizes at the boundary between female gametes in Arabidopsis thaliana. Mol. Reprod. Dev. 86, 925
.https://doi.org/10.1002/mrd.23175
Nozoye T., von Wiren N., Sato Y., Higashiyama T., Nakanishi H., Nishizawa N.K. (2019) Characterization of the nicotianamine exporter ENA1 in rice. Front. Plant Sci. 10, 502.
https://doi.org/10.3389/fpls.2019.00502
Maki H., Sakaoka S., Itaya T., Suzuki T., Mabuchi K., Amabe T., Suzuki N., Higashiyama T., Tada Y., Nakagawa T., Morikami A., Tsukagoshi H. (2019) ANAC032 regulates root growth through the MYB30 gene regulatory network. Sci. Reports 9, 11358.
https://doi.org/10.1038/s41598-019-47822-0
Kimata Y., Kato T., Higaki T., Kurihara D., Yamada T., Segami S., Morita M.T., Maeshima M., Hasezawa S., Higashiyama T., Tasaka M. Ueda M. (2019) Polar vacuolar distribution is essential for accurate asymmetric division of Arabidopsis zygotes. Proc. Natl. Acad. Sci. USA 116, 2338-2343.
https://doi.org/10.1073/pnas.1814160116
Ohno M., Ando T., Priest D.G., Kumar V., Yoshida Y., Taniguchi Y. (2019) Sub-nucleosomal genome structure reveals distinct nucleosome folding motifs. Cell 176, 520-534.e25.
https://doi.org/10.1016/j.cell.2018.12.014
Yoshida Y., Mogi Y. (2019) How do plastids and mitochondria divide? Microscopy 68, 45-56.
https://doi.org/10.1093/jmicro/dfy132
Xiao W., Su S., Higashiyama T., Luo D. (2019) A homolog of the ALOG family controls corolla tube differentiation in Torenia fournieri. Development 146, dev177410.
https://doi.org/10.1242/dev.177410
Yoshida Y., Taniguchi Y. (2019) Simultaneous single-cell measurements demonstrate a positive correlation between RNA copy number for mitochondrial division and fusion genes and mitochondrial fragmentation. Cytologia 84, 15–23.
https://doi.org/10.1508/cytologia.84.15
Yamamoto S., Uchida Y., Ohtani T., Nozaki E., Yin C., Goto Y., Kaminatsui N., Higashiyama T., Suzuki T., Takemoto T., Shiraishi Y., Kuroiwa A. (2019) Hoxa13 regulates the expression of common Hox target genes involved in cartilage development to coordinate the expansion of the autopod anlagen. Dev. Growth Differ. 61, 228-251.
https://doi.org/10.1111/dgd.12601
Kurita K., Sakamoto Y., Naruse S., Matsunaga T.M., Arata H., Higashiyama T., Habu Y., Utsumi Y., Utsumi C., Tanaka M., Takahashi S., Kim J.M., Seki M., Sakamoto T., Matsunaga S. (2019) Intracellular localization of histone deacetylase HDA6 in plants. J. Plant Res. 132, 629-640.
https://doi.org/10.1007/s10265-019-01124-8
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